Documentation by YARD 0.9.37
Alphabetic Index
File Listing
README
LICENSE
About Docs
API V1
API V2
Associated Applications
Statement of Truth
The complex matter of owning work
schema
Namespace Listing A-Z
Top Level Namespace
A
AASM
Abilities
(Core)
AbilitiesController
(Admin)
Ability
AbilityAnalysis
Accession
AccessionBehaviour
(Submission)
AccessionService
Accessionable
Accessionable
(Accession)
AccessionableFile
(Accession::Accessionable)
AccessionedFile
(AccessionService)
AccessionedTag
(Metadata)
AccessioningRequired
(Request)
ActionBehaviour
(Core::Abilities)
Actions
(Core::Io::Json::Grammar)
Actions
(Core::Endpoint::BasicHandler)
ActiveRecordError
(ActiveRecord)
ActsAsDescriptable
AdapterType
(TagGroup)
AddSpikedInControlHandler
(Tasks)
AddSpikedInControlTask
AdditionalInput
(PlatePurpose)
AdminController
Administrator
(Ability)
Advanced
(ProductCriteria)
AdvancedSearchController
AkerBarcode
(Barcode::FormatHandlers)
AlderleyParkEagle
(Barcode::FormatHandlers)
AlderlyParkV1
(Barcode::FormatHandlers)
AlderlyParkV2
(Barcode::FormatHandlers)
Aliquot
(Io)
Aliquot
AliquotError
(PlatesHelper)
AliquotExtensions
(Api::Messages::QcResultIo)
AliquotExtensions
(Api::Messages::FlowcellIo)
AliquotIndex
AliquotIndexer
AliquotIo
(Api)
AliquotResource
(Api::V2)
AliquotScopes
(AliquotIndexer)
AliquotUpdater
(SampleManifestExcel::Tags)
Aliquotable
(Aliquot)
AlwaysValidValidator
(DelegateValidation)
Api
ApiApplication
ApiIoSupport
(Io::AssetAudit)
ApiIoSupport
(Io::Supplier)
ApiTools
ApiV2Generator
Application
(Core::Abilities)
Application
(Informatics)
ApplicationController
ApplicationHelper
ApplicationRecord
ApplicationRecordLoader
(RecordLoader)
ApplyIdToNameOnCreate
(Asset)
ArgumentBuilder
(SequencescapeExcel::Column)
Array
(Io)
ArrayExpressTag
(Accessionable)
ArrayWithDefault
(RequestType::Validator)
ArrayWithFieldList
AsFixedGroupByPlate
(TagLayout)
AsGroupByPlate
(TagLayout)
Assay
(FluidigmFile)
Asset
(Io)
Asset
AssetAudit
(Io)
AssetAudit
AssetAudit
(BroadcastEvent)
AssetAuditResource
(Api::V2)
AssetAudits
(Endpoints)
AssetAuditsController
AssetBarcode
AssetCreation
AssetDetails
(StudyReport)
AssetExtensions
(Api::Messages::QcResultIo)
AssetGroup
(Io)
AssetGroup
AssetGroup
(ModelExtensions)
AssetGroupAsset
AssetGroupBehaviour
(Submission)
AssetGroups
(Endpoints)
AssetGroupsController
(Studies)
AssetLink
AssetLinkIo
(Api)
AssetPlate
(LabelPrinter::Label)
AssetPlateDouble
(LabelPrinter::Label)
AssetRedirect
(LabelPrinter::Label)
AssetResource
(Api::V2)
AssetSetQcStateEvent
(Event)
AssetShape
AssetShapeLoader
(RecordLoader)
AssetSubmissionFinder
(Submission)
AssetTube
(LabelPrinter::Label)
Assets
(Endpoints)
AssetsController
AssetsController
(NpgActions)
AssetsHelper
AssignTagsTask
AssignTagsToTubesTask
AssignTubesToMultiplexedWellsTask
Association
(Attributable)
Association
(Core::Endpoint::BasicHandler::Associations::BelongsTo::Handler)
Association
(SubmissionPool)
AssociationHandling
(Core::Io::Base::JsonFormattingBehaviour::Input)
AssociationTypeMismatch
(ActiveRecord)
Associations
(Tag)
Associations
(Program)
Associations
(QcFile)
Associations
(Document)
Associations
(AssetLink)
Associations
(StudyType)
Associations
(BaitLibrary)
Associations
(BudgetDivision)
Associations
(FacultySponsor)
Associations
(ProjectManager)
Associations
(SampleManifest)
Associations
(ReferenceGenome)
Associations
(Purpose::Relationship)
Associations
(Transfer)
Associations
(DataReleaseStudyType)
Attributable
Attribute
(Attributable)
AttributeUpdater
(Tube)
AttributeUpdater
(Well)
Attributes
(SequencescapeExcel::Helpers)
AuthenticatedSystem
AuthenticatedTestHelper
Authentication
(User)
Authentication
(Core::Service)
Authorized
(Role)
AutoMultiplexing
(Request)
AutomatedOrder
AxlsxWorksheet
(SequencescapeExcel::CoreExtensions)
B
BaitLibrariesController
(Admin)
BaitLibrary
(Io)
BaitLibrary
BaitLibraryLayout
(Io)
BaitLibraryLayout
BaitLibraryLayout
(ModelExtensions)
BaitLibraryLayoutResource
(Api::V2)
BaitLibraryLayouts
(Endpoints)
BaitLibraryRequest
(Pulldown::Requests)
BaitLibrarySuppliersController
(Admin::BaitLibraries)
BaitLibraryType
BaitLibraryTypesController
(Admin::BaitLibraries)
BaitMetadata
(Pulldown::Requests::BaitLibraryRequest)
Barcode
BarcodeIo
(Api::Messages)
BarcodePrefix
BarcodePrinter
(Io)
BarcodePrinter
BarcodePrinter
(ModelExtensions)
BarcodePrinterBehaviour
(SampleManifest)
BarcodePrinterResource
(Api::V2)
BarcodePrinterType
BarcodePrinterType1DTube
BarcodePrinterType384DoublePlate
BarcodePrinterType384Plate
BarcodePrinterType96Plate
BarcodePrinterTypeLoader
(RecordLoader)
BarcodePrinters
(Endpoints)
BarcodePrintersController
BarcodePrintersHelper
Barcodeable
(Barcode)
Base
(ActiveRecord)
Base
(Api)
Base
(Metadata)
Base
(Core::Io)
Base
(Core::Abilities)
Base
(Core::Endpoint)
Base
(Accessionable)
Base
(StateChanger)
Base
(CommentsProxy)
Base
(Robot::Generator)
Base
(Tube::AttributeUpdater)
Base
(Well::AttributeUpdater)
Base
(Robot::Verification)
Base
(CherrypickTask::PickTarget)
Base
(SampleManifest::PlateBehaviour)
Base
(SampleManifest::SharedTubeBehaviour)
Base
(SequencescapeExcel::Worksheet)
Base
(SampleManifestExcel::Upload)
Base
(SampleManifestExcel::Upload::Processor)
Base
(SequencescapeExcel::SpecialisedField)
BaseController
(Sdb)
BaseHandler
(Tasks)
BaseLoginProxy
BasePlate
(LabelPrinter::Label)
BasePlateDouble
(LabelPrinter::Label)
BaseRegExBarcode
(Barcode::FormatHandlers)
BaseResource
(Api::V2)
BaseTube
(LabelPrinter::Label)
BaseUser
(Ability)
Basic
(ProductCriteria)
BasicHandler
(Core::Endpoint)
Batch
(Io)
Batch
BatchCreationValidator
BatchIo
(Api)
BatchPlate
(LabelPrinter::Label)
BatchPlateDouble
(LabelPrinter::Label)
BatchPlates
(LabelPrinter::Label)
BatchRedirect
(LabelPrinter::Label)
BatchRequest
BatchRequestIo
(Api)
BatchSubmenuPresenter
(Presenters)
BatchTube
(LabelPrinter::Label)
BatchValidation
(Pipeline)
Batches
(Endpoints)
BatchesController
BatchesHelper
BatchesJson
(PlatePicks)
Beckman
(Robot::Generator)
Behaviour
(Core::Service::Error)
BelongsTo
(Core::Endpoint::BasicHandler::Associations)
Benchmarking
(Core)
BetweenPlateAndTubes
(Transfer)
BetweenPlates
(Io::Transfer)
BetweenPlates
(Transfer)
BetweenPlatesBySubmission
(Io::Transfer)
BetweenPlatesBySubmission
(Transfer)
BetweenSpecificTubes
(Io::Transfer)
BetweenSpecificTubes
(Transfer)
BetweenTubesBySubmission
(Io::Transfer)
BetweenTubesBySubmission
(Transfer)
BindingKitBarcodeTask
BioanalysisCsvParser
(Parsers)
Bioscan
(Api::V2)
BioscanControlType
(SequencescapeExcel::SpecialisedField)
BioscanSupplierName
(SequencescapeExcel::SpecialisedField)
BlockManySubjectAssociation
(BroadcastEvent::SubjectHelpers)
BlockMetadataFinder
(BroadcastEvent::MetadataHelpers)
BlockSingleSubjectAssociation
(BroadcastEvent::SubjectHelpers)
BlockTargetLookup
(BroadcastEvent::SubjectHelpers)
BootstrapHelper
Bound
(Core::Endpoint::BasicHandler::Actions)
BrantsBridge
(Barcode::FormatHandlers)
BrantsBridgeV2
(Barcode::FormatHandlers)
BrantsBridgeV3
(Barcode::FormatHandlers)
BroadcastEvent
BudgetDivision
Buffer
(Core::Io)
Builder
(PreCapturePool)
BuilderBase
(Metadata)
BulkSubmission
BulkSubmissionExcel
BulkSubmissionsController
BulkTransfer
(Io)
BulkTransfer
BulkTransferResource
(Api::V2)
BulkTransfers
(Endpoints)
ByColumn
(CherrypickTask::PickTarget)
ByInterlacedColumn
(CherrypickTask::PickTarget)
ByLabware
(PickList::RecordCache)
ByReceptacle
(PickList::RecordCache)
ByRow
(CherrypickTask::PickTarget)
C
Cache
(SampleManifestExcel::Upload)
CacheBarcodes
(Dev::PlateBarcode)
CambridgeAZ
(Barcode::FormatHandlers)
CambridgeAZEagle
(Barcode::FormatHandlers)
CambridgeAZV2
(Barcode::FormatHandlers)
CanCreateStockAsset
(Asset::Stock)
CapybaraFailureLogger
CapybaraTimeoutPatch
CarrierWave
Cell
(SequencescapeExcel)
Cgap
(Barcode::FormatHandlers)
CgapPlate
(Barcode::FormatHandlers)
CgapRack
(Barcode::FormatHandlers)
ChainLink
(Submission::FlexibleRequestGraph)
ChangeDecision
(Request)
ChangeDecisionError
(Request::ChangeDecision)
ChangesOwner
(Asset::Ownership)
Cherrypick
CherrypickForFluidigmRequest
CherrypickForPulldownPipeline
CherrypickForPulldownRequest
CherrypickHandler
(Tasks)
CherrypickPipeline
CherrypickRequest
CherrypickTask
CherrypickingPipeline
ChildPurpose
(SpecificTubeCreation)
ChildTube
(TubeCreation)
Children
(PlateCreation)
ChromiumTagGroup
(SequencescapeExcel::SpecialisedField)
ChromiumTagWell
(SequencescapeExcel::SpecialisedField)
Clash
(Pooling::TagClashReport)
ClashInfo
(Pooling::TagClashReport)
ClashesFinder
(SampleManifestExcel::Tags)
ClassMethods
(ApiTools)
ClassMethods
(Validateable)
ClassMethods
(HasBehaviour)
ClassMethods
(QcReport::StateMachine)
ClassMethods
(LabWhereClient::EndpointCreateActions)
ClassMethods
(LabWhereClient::EndpointUpdateActions)
ClassMethods
(AssetLink::Associations)
ClassMethods
(Core::Abilities::Base)
ClassMethods
(Attributable)
ClassMethods
(Asset::Ownership::ChangesOwner)
ClassMethods
(Aliquot::Aliquotable)
ClassMethods
(User::Authentication)
ClassMethods
(Api::BatchRequestIo::Extensions)
ClassMethods
(Api::PlatePurposeIo::Extensions)
ClassMethods
(Api::ReferenceGenomeIo::Extensions)
ClassMethods
(Api::PacBioLibraryTubeIo::Extensions)
ClassMethods
(Request::LibraryManufacture)
ClassMethods
(Api::MultiplexedLibraryTubeIo::Extensions)
ClassMethods
(SequencescapeExcel::List)
ClassMethods
(Api::PulldownMultiplexedLibraryTubeIo::Extensions)
ClassMethods
(SequencescapeExcel::SubclassChecker)
ClassMethods
(SequencescapeExcel::Helpers::Attributes)
ClassMethods
(SampleManifestExcel::Tags::AliquotUpdater)
ClassMethods
(Api::Messages::FlowcellIo::Extensions)
ClassMethods
(Api::StudySampleIo::Extensions)
ClassMethods
(Api::LibraryTubeIo::Extensions)
ClassMethods
(Api::SampleTubeIo::Extensions)
ClassMethods
(Api::AssetLinkIo::Extensions)
ClassMethods
(Api::RequestIo::Extensions)
ClassMethods
(Api::ProjectIo::Extensions)
ClassMethods
(Api::AliquotIo::Extensions)
ClassMethods
(Api::SampleIo::Extensions)
ClassMethods
(Api::StudyIo::Extensions)
ClassMethods
(Api::PlateIo::Extensions)
ClassMethods
(Api::BatchIo::Extensions)
ClassMethods
(Api::WellIo::Extensions)
ClassMethods
(Api::LaneIo::Extensions)
ClassMethods
(Api::TagIo::Extensions)
Collection
(Core::Io)
Column
(SequencescapeExcel)
ColumnList
(SequencescapeExcel)
Columns
(SequencescapeExcel::Configuration)
CombByRows
(TagLayout)
CombinatorialSequential
(TagLayout)
Comment
(Io)
Comment
CommentResource
(Api::V2)
Commentable
Comments
(Endpoints)
CommentsController
(Batches)
CommentsController
(Labware)
CommentsController
(Samples)
CommentsController
(Studies)
CommentsController
(Requests)
CommentsController
(Receptacles)
CommentsProxy
Comparison
(ProductCriteria::Basic)
CompositeAbility
(Core::Abilities)
CompositeValidator
(DelegateValidation)
CompoundAliquot
CompoundSampleHelper
Concentration
(Well::AttributeUpdater)
Concerns
(Heron::Factories)
ConditionalFormatting
(SequencescapeExcel)
ConditionalFormattingDefault
(SequencescapeExcel)
ConditionalFormattingDefaultList
(SequencescapeExcel)
ConditionalFormattingList
(SequencescapeExcel)
Configuration
(Accession)
Configuration
(SequencescapeExcel)
Configuration
(BulkSubmissionExcel)
Configuration
(SampleManifestExcel)
Contact
(Accession)
Contact
(Accessionable::Submission)
ContentFiltering
(Core::Service)
Contents
(Heron::Factories::Concerns)
Control
ControlLaneExtensions
(Api::Messages::FlowcellIo)
ControlLocator
(CherrypickTask)
ControlPlate
ControlRequest
ControlRequestTypeCreation
ControlType
(SequencescapeExcel::SpecialisedField)
ControlledDestinations
(Transfer)
ControllerHelper
Converters
(SampleManifestExcel::Upload)
Coordinate
(Map)
CoordinatesSupport
(Heron::Factories::Concerns)
Core
(SampleManifest::PlateBehaviour)
Core
(SampleManifest::TubeRackBehaviour)
Core
(SampleManifest::SampleTubeBehaviour)
Core
(SampleManifest::UnspecifiedBehaviour)
Core
(SampleManifest::LibraryTubeBehaviour)
Core
(SampleManifest::LibraryPlateBehaviour)
Core
(SampleManifest::MultiplexedLibraryBehaviour)
Core
CoreBehaviour
(SampleManifest)
CoreExtensions
(Accession)
CoreExtensions
(SequencescapeExcel)
Counter
(Request::Statistics)
Country
(Insdc)
CreateAssetRequest
CreationChild
(PlateCreation)
Creator
(Plate)
CreatorParameters
(Plate)
CriteriaInvalid
(Endpoints::Uuids::Search)
CronScripts
Crossable
(Submission)
CsvParserClient
Current
(Sample)
CustomMetadatum
CustomMetadatumCollection
(Io)
CustomMetadatumCollection
CustomMetadatumCollectionResource
(Api::V2)
CustomMetadatumCollections
(Endpoints)
CustomText
CustomTextsController
(Admin)
CustomValidator
(Attributable)
CustomerRequest
CustomerResponsibility
(Request)
D
Dac
(Accessionable)
Data
(SampleManifestExcel::Upload)
DataAccessCoordinator
(Ability)
DataForSubstitution
(Aliquot)
DataRelease
DataReleaseStudyType
DataWorksheet
(BulkSubmissionExcel::Worksheet)
DataWorksheet
(SampleManifestExcel::Worksheet)
DbFile
DbTableArchiver
(MigrationExtensions)
DefaultConfig
(MethodBenchmarking)
DelayedJobBehaviour
(Submission)
DelayedJobsController
(Admin)
DelayedJobsHelper
DelegateError
(DelegateValidation::Validator)
DelegateValidation
Deployed
DeploymentEnvironment
Deprecatable
(SharedBehaviour)
DeprecatedAction
(Core::Service)
DeprecatedBehaviours
(Aliquot)
DeprecatedError
(RequestType)
DeprecatedSearch
(Search)
Descriptor
DescriptorJavascriptHelper
Dev
DilutionParser
(Parsers)
DilutionPlate
DilutionPlatePurpose
(Io)
DilutionPlatePurpose
DilutionPlatePurposes
(Endpoints)
DirectDatabase
(CarrierWave::Storage)
Directory
(FluidigmFile::Finder)
Document
DocumentsController
DocumentsController
(Studies)
Doublet
(Submission::FlexibleRequestGraph)
Download
(BulkSubmissionExcel)
Download
(SampleManifestExcel)
Download
(SequencescapeExcel::Helpers)
DownloadsController
(BulkSubmissionExcel)
DownstreamAliquotsRemoval
(Receptacle)
DriverFilesController
DualIndexTagSet
(SequencescapeExcel::SpecialisedField)
DualIndexTagWell
(SequencescapeExcel::SpecialisedField)
DualIndexWalker
(TagLayout)
DummyDirectionModule
(TagLayout)
DummyWalkingHelper
(TagLayout)
E
EagerLoadingBehaviour
(Core::Io::Base)
Eagle
(Barcode::FormatHandlers)
Ean13Incompatible
(Barcode::FormatHandlers)
EastLondonGenesAndHealth
(Barcode::FormatHandlers)
EastLondonGenesAndHealthV2
(Barcode::FormatHandlers)
EgaAccessionService
EgaTag
(Accessionable)
EnaAccessionService
EncodingChanges
(MigrationExtensions)
Endpoint
(LabWhereClient)
EndpointCreateActions
(LabWhereClient)
EndpointHandler
(Api)
EndpointHandling
(Core::Service)
EndpointLookup
(Core::Endpoint::BasicHandler)
EndpointUpdateActions
(LabWhereClient)
Endpoints
Equality
(Accession)
Equipment
Error
(Core::Service)
Error
(Request::SampleCompoundAliquotTransfer)
ErrorHandling
(Core::Service)
Event
Event
(Heron::Factories)
EventFactory
EventSender
Eventful
(Heron::Factories::Concerns)
EventfulMailer
EventfulRecord
EventsController
EventsController
(Studies)
ExampleData
(SampleManifestExcel::Tags)
ExportPoolXpToTractionController
(Api::V2::Bioscan)
ExportPoolXpToTractionJob
ExtendedValidator
Extensions
(Api::BatchRequestIo)
Extensions
(Api::PlatePurposeIo)
Extensions
(Api::ReferenceGenomeIo)
Extensions
(AASM)
Extensions
(Api::PacBioLibraryTubeIo)
Extensions
(Api::MultiplexedLibraryTubeIo)
Extensions
(Api::PulldownMultiplexedLibraryTubeIo)
Extensions
(Api::Messages::QcResultIo)
Extensions
(Api::Messages::FlowcellIo)
Extensions
(Api::StudySampleIo)
Extensions
(Api::LibraryTubeIo)
Extensions
(Api::SampleTubeIo)
Extensions
(Api::AssetLinkIo)
Extensions
(Api::RequestIo)
Extensions
(Api::ProjectIo)
Extensions
(Api::AliquotIo)
Extensions
(Api::SampleIo)
Extensions
(Api::StudyIo)
Extensions
(Api::PlateIo)
Extensions
(Api::BatchIo)
Extensions
(Api::WellIo)
Extensions
(Api::LaneIo)
Extensions
(Api::TagIo)
External
(Barcode::FormatHandlers)
ExternalLibraryCreationRequest
ExternalProperty
ExternalReleaseEvent
ExternalSubjects
(BroadcastEvent::Helpers)
ExtractionAttribute
(Io)
ExtractionAttribute
ExtractionAttributes
(Endpoints)
F
Factories
(Heron)
Factory
(SangerSampleId)
Factory
(WorkOrder)
Factory
(Core::Endpoint::BasicHandler::Actions)
FacultySponsor
FacultySponsorsController
(Admin)
FailUpstream
(IlluminaHtp::Requests::LibraryCompletion)
Failure
FieldCollectionDate
(Accessionable::Base::Tag)
FieldCountryOfOrigin
(Accessionable::Base::Tag)
FieldInfo
FieldInfosHelper
FieldSerializer
(Accessionable::Base::Tag)
File
(QcReport)
File
(CarrierWave::Storage::DirectDatabase)
FindAssetByBarcode
(Search)
FindIlluminaAPlates
(Search)
FindIlluminaAStockPlates
(Search)
FindIlluminaBPlates
(Search)
FindIlluminaBPlatesForUser
(Search)
FindIlluminaBStockPlates
(Search)
FindIlluminaCPlates
(Search)
FindIlluminaCTubes
(Search)
FindLotByBatchId
(Search)
FindLotByLotNumber
(Search)
FindModelByName
(Search)
FindOutstandingIlluminaBPrePcrPlates
(Search)
FindPlates
(Search)
FindPlatesForUser
(Search)
FindPulldownPlates
(Search)
FindPulldownPlatesForUser
(Search)
FindPulldownStockPlates
(Search)
FindQcableByBarcode
(Search)
FindRobotByBarcode
(Search)
FindSourceAssetsByDestinationAssetBarcode
(Search)
FindTubes
(Search)
FindUserByLogin
(Search)
FindUserBySwipecardCode
(Search)
Finder
(Asset)
Finder
(FluidigmFile)
FlashTruncation
FlexibleCherrypickPipeline
FlexibleRequestGraph
(Submission)
FlexibleSubmission
FlowcellIo
(Api::Messages)
FlowcellType
FlowcellTypeLoader
(RecordLoader)
FlowcellTypeRequestTypeLoader
(RecordLoader)
FlowcellTypeValidator
(RequestType::Validator)
FlowcellTypesRequestType
Fluidigm
(Barcode::FormatHandlers)
FluidigmBehaviour
(Plate)
FluidigmError
(Plate::FluidigmBehaviour)
FluidigmFile
FluidigmPlateIo
(Api::Messages)
FluidigmTemplateTask
FluidigmWell
(FluidigmFile)
FluidxBarcode
(Barcode::FormatHandlers)
FontawesomeHelper
ForeignBarcodes
(Heron::Factories::Concerns)
FormBuilder
(Metadata)
FormField
(UatActions)
FormObject
(TagGroup)
FormatHandlers
(Barcode)
Formatting
(SampleManifestExcel::Tags::Validator)
Formula
(SequencescapeExcel)
Fragment
FragmentResource
(Api::V2)
FromPlateToSpecificTubes
(Io::Transfer)
FromPlateToSpecificTubes
(Transfer)
FromPlateToSpecificTubesByPool
(Io::Transfer)
FromPlateToSpecificTubesByPool
(Transfer)
FromPlateToTube
(Io::Transfer)
FromPlateToTube
(Transfer)
FromPlateToTubeByMultiplex
(Io::Transfer)
FromPlateToTubeByMultiplex
(Transfer)
FromPlateToTubeBySubmission
(Io::Transfer)
FromPlateToTubeBySubmission
(Transfer)
G
GbsRequest
(IlluminaHtp::Requests)
GelDilutionPlate
GelsController
GenderMarkers
(Well::AttributeUpdater)
GenerateCreateAssetRequestsJob
GenerateFluidxBarcodes
(UatActions)
GeneratePlateConcentrations
(UatActions)
GeneratePlates
(UatActions)
GeneratePrimerPanel
(UatActions)
GenerateProject
(UatActions)
GenerateQcResults
(UatActions)
GenerateSampleManifest
(UatActions)
GenerateSpikedBufferTube
(UatActions)
GenerateStudy
(UatActions)
GenerateTagGroup
(UatActions)
GenerateTagLayoutTemplate
(UatActions)
GenerateTagPlates
(UatActions)
GenerateTaggedPlates
(UatActions)
GenerateTubeRacks
(UatActions)
GenerateTubes
(UatActions)
Generator
(SampleManifest)
Generator
(Robot)
GenotypingPipeline
GenotypingRequest
GetYourQcCompletedTubesHereController
Glasgow
(Barcode::FormatHandlers)
GlasgowEagle
(Barcode::FormatHandlers)
GlasgowV2
(Barcode::FormatHandlers)
GlasgowV3
(Barcode::FormatHandlers)
Globals
(Informatics)
Grammar
(Core::Io::Json)
GridIon
(Request::Traction)
GroupByParent
(Pipeline)
GroupLinePresenter
(Presenters)
GroupedPipelineInboxPresenter
(Presenters)
GrouperByParent
(Pipeline)
GrouperByParentAndSubmission
(Pipeline)
GrouperBySubmission
(Pipeline)
GrouperForPipeline
(Pipeline)
GroupingHelpers
(Request)
Guard
(Core::Endpoint::BasicHandler::Actions::Guards)
GuardChain
(Core::Endpoint::BasicHandler::Actions::Guards)
GuardProxy
(Core::Endpoint::BasicHandler::Actions::Guards)
Guards
(Core::Endpoint::BasicHandler::Actions)
H
Hamilton
(Robot::Generator)
HamiltonDefault
(Robot::Generator::Behaviours)
Handler
(Tasks::SetDescriptorsHandler)
Handler
(Tasks::AddSpikedInControlHandler)
Handler
(Core::Endpoint::BasicHandler::Actions::Bound)
Handler
(Core::Endpoint::BasicHandler::Associations::HasMany)
Handler
(Core::Endpoint::BasicHandler::Associations::BelongsTo)
Handler
(Core::Endpoint::Base::InstanceBehaviour)
Handler
(Core::Endpoint::Base::ModelBehaviour)
Handlers
(Core::Endpoint::BasicHandler)
HasBehaviour
HasFile
(Core::Endpoint::BasicHandler::Associations)
HasMany
(Core::Endpoint::BasicHandler::Associations)
HasNoTargetAsset
(Request)
HasPrimerPanel
(Request)
HashWrapper
(Submission::RequestOptionsBehaviour)
Health
HealthController
HealthServicesLaboratoriesV1
(Barcode::FormatHandlers)
Helper
(Limber)
HelperTagValue
(Accession::Tag)
Helpers
(Accession)
Helpers
(Core::Service::Authentication)
Helpers
(Core::Service::ErrorHandling)
Helpers
(Core::Service::ContentFiltering)
Helpers
(SequencescapeExcel)
Helpers
(BroadcastEvent)
Heron
Heron
(Api::V2)
HeronRequest
(IlluminaHtp::Requests)
HeronTailed
(Barcode::FormatHandlers)
HeronTailedRequest
(IlluminaHtp::Requests)
HiSeqSequencingRequest
HomeController
(Sdb)
HomesController
HttpLoginProxy
I
I5
(SequencescapeExcel::SpecialisedField)
I7
(SequencescapeExcel::SpecialisedField)
IbdResponse
(Barcode::FormatHandlers)
Identifier
IllegalOperation
Immutable
(SharedBehaviour)
Implement
ImportCountries
(Insdc)
ImportFluidigmData
(CronScripts)
InColumns
(TagLayout)
InColumnsThenColumns
(TagLayout)
InColumnsThenRows
(TagLayout)
InInverseColumns
(TagLayout)
InInverseRows
(TagLayout)
InRows
(TagLayout)
InboxExtensions
(Pipeline)
InboxGroupedBySubmission
(Pipeline)
Indestructable
(SharedBehaviour)
Indexable
(AliquotIndexer)
Infinium
(Barcode::FormatHandlers)
Informatics
InformationController
(Studies)
InitialPurpose
(PlatePurpose)
InitialStockTube
(StateChanger)
InitialStockTubePurpose
(IlluminaHtp)
Initializable
(Core)
Initializer
(Core::Service::Response)
Initializer
(Core::Initializable)
InnerAction
(Core::Endpoint::BasicHandler::Actions)
Input
(PlatePurpose)
Input
(Core::Io::Base::JsonFormattingBehaviour)
InputPlate
(StateChanger)
Insdc
InsertSize
(Aliquot)
InsertSizeFrom
(SequencescapeExcel::SpecialisedField)
InsertSizeTo
(SequencescapeExcel::SpecialisedField)
InstanceBehaviour
(Core::Endpoint::Base)
InstanceMethods
(Core::Initializable)
InstanceMethods
(Attributable::Association::Target)
InstanceMethods
(Submission::StateMachine)
InstanceMethods
(Core::Endpoint::BasicHandler::Actions::Standard)
IntegrationSuiteTools
(UatActions)
Interface
(Core::Io::Json::Stream)
Intermediate
(Core::Io::Json::Grammar)
InvalidBatch
(Tasks::PlateTransferHandler)
InvalidBodyContentType
(Core::Service::ContentFiltering)
InvalidFile
(FluidigmFile)
InvalidFile
(Parsers::QuantParser)
InvalidFile
(Parsers::PlateReaderParser)
InvalidFile
(Parsers::BioanalysisCsvParser)
InvalidRequestedContentType
(Core::Service::ContentFiltering)
InvalidRequestedContentTypeOnFile
(Core::Service::ContentFiltering)
Io
IscLibraryRequest
(Pulldown::Requests)
IscLibraryRequestPart
(Pulldown::Requests)
Item
Item
(Informatics::View::Menu)
Item
(Informatics::View::Tabs)
J
Job
(AssetLink)
Json
(Core::Io)
Json
(Core::Endpoint::BasicHandler)
JsonError
(Core::Service::ErrorHandling::Helpers)
JsonFormattingBehaviour
(Core::Io::Base)
L
LabEvent
LabEvent
(BroadcastEvent)
LabManager
(Ability)
LabSearchesController
LabUser
(Ability::Shared)
LabWhere
(LabWhereClient)
LabWhereClient
Label
(LabelPrinter)
LabelPrinter
Labware
(Io)
Labware
Labware
(LabWhereClient)
Labware
(Lane)
Labware
(Api::V2::SharedBehaviour)
LabwareCompletion
(WorkCompletion)
LabwareController
LabwareFailed
(BroadcastEvent)
LabwareFailedEvent
(Event)
LabwareReceived
(BroadcastEvent)
LabwareResource
(Api::V2)
LabwareSearch
(LabWhereClient)
LabwhereReception
LabwhereReceptionsController
Lane
(Io)
Lane
LaneExtensions
(Api::Messages::FlowcellIo)
LaneIo
(Api)
LaneResource
(Api::V2)
Lanes
(Endpoints)
Latin1Validator
Ldap
(User::Authentication)
Leaf
(Core::Io::Json::Grammar)
LeamingtonSpa
(Barcode::FormatHandlers)
LeamingtonSpaV2
(Barcode::FormatHandlers)
LeamingtonSpaV3
(Barcode::FormatHandlers)
LegacyPipeline
LibPoolNormTubeGenerator
LibraryAndMultiplexingTemplateConstructor
(Limber::Helper)
LibraryAssets
(SampleManifest::CoreBehaviour)
LibraryComplete
(BroadcastEvent)
LibraryCompletion
(IlluminaHtp::Requests)
LibraryCreation
(Request)
LibraryCreation
(Pulldown::Requests)
LibraryCreationRequest
(Io)
LibraryCreationRequest
LibraryCreationRequests
(Endpoints)
LibraryDriven
(ProductCatalogue)
LibraryEvent
(Io)
LibraryEvent
LibraryEvents
(Endpoints)
LibraryManufacture
(Request)
LibraryOnlyTemplateConstructor
(Limber::Helper)
LibraryPlateBehaviour
(SampleManifest)
LibraryRequest
(IlluminaC::Requests)
LibraryStart
(BroadcastEvent)
LibraryTube
(Io)
LibraryTube
LibraryTube
(SampleManifestExcel::Upload::Processor)
LibraryTube
(ModelExtensions)
LibraryTubeBehaviour
(SampleManifest)
LibraryTubeIo
(Api)
LibraryTubes
(Endpoints)
LibraryType
LibraryType
(SequencescapeExcel::SpecialisedField)
LibraryTypeLoader
(RecordLoader)
LibraryTypeValidator
(RequestType::Validator)
LibraryTypesRequestType
LinearRequestGraph
(Submission)
LinearSubmission
LinefeedFix
Link
(Well)
List
(Core::Io)
List
(Informatics::View::Menu)
List
(Informatics::View::Tabs)
List
(SequencescapeExcel)
Local
(User::Authentication)
Location
(LabWhereClient)
LocationReport
LocationReportForm
(LocationReport)
LocationReportJob
LocationReportsController
LocationType
(LabWhereClient)
Logging
(Core)
Lot
(Io)
Lot
LotResource
(Api::V2)
LotType
(Io)
LotType
LotTypeResource
(Api::V2)
LotTypes
(Endpoints)
Lots
(Endpoints)
M
Manager
(Ability)
ManifestType
(SampleManifestExcel::ManifestTypeList)
ManifestTypeList
(SampleManifestExcel)
ManifestUtil
Manual
(ProductCatalogue)
Map
MbraveTagsCreator
Menu
(Informatics::View)
Messenger
MessengerCreator
MessengersController
Metadata
(Study)
Metadata
(Sample)
Metadata
(Project)
Metadata
(Metadata)
Metadata
(SequencingRequest)
Metadata
(PacBioLibraryTube)
Metadata
(LibraryCreationRequest)
Metadata
(Request::LibraryCreation)
Metadata
(Request::Traction::GridIon)
Metadata
(PacBioSequencingRequest)
Metadata
(PacBioSamplePrepRequest)
Metadata
(PbmcPoolingCustomerRequest)
Metadata
(CherrypickForFluidigmRequest)
Metadata
MetadataHelpers
(BroadcastEvent)
MetadatableClassMethods
(BroadcastEvent::MetadataHelpers)
MethodBenchmarking
MethodNotAllowed
(Core::Service)
MiSeqSequencingRequest
Mixin
(Receptacle::DownstreamAliquotsRemoval)
ModelBehaviour
(Core::Endpoint::Base)
Molarity
(Tube::AttributeUpdater)
MovieLengthTask
MultiTarget
(BroadcastEvent::SubjectHelpers)
MultipleDoubleLabels
(LabelPrinter::Label)
MultipleLabels
(LabelPrinter::Label)
MultiplexedCherrypickingTask
MultiplexedLibraryBehaviour
(SampleManifest)
MultiplexedLibraryCreationRequest
(Io)
MultiplexedLibraryCreationRequest
MultiplexedLibraryCreationRequests
(Endpoints)
MultiplexedLibraryTube
(Io)
MultiplexedLibraryTube
MultiplexedLibraryTube
(SampleManifestExcel::Upload::Processor)
MultiplexedLibraryTube
(ModelExtensions)
MultiplexedLibraryTubeIo
(Api)
MultiplexedLibraryTubes
(Endpoints)
MultiplexedLink
(Submission::FlexibleRequestGraph)
MultiplexedTube
(LabelPrinter::Label)
Multiplexing
(Request)
MxTube
(StateChanger)
MxTubePurpose
(IlluminaHtp)
N
Named
(SharedBehaviour)
NamedScopeHelpers
(ModelExtensions::Plate)
Nested
(Core::Endpoint::BasicHandler::Actions::Factory)
NestedValidation
NestedValidator
(NestedValidation)
Newcastle
(Barcode::FormatHandlers)
NoAccessionService
NoPcrLibraryRequest
(IlluminaC::Requests)
NoSpecializedValidation
(SampleManifest::CoreBehaviour)
Node
(Core::Io::Json::Grammar)
NonNilHash
(ModelExtensions::Order)
None
(Request)
NovaseqxPeValidator
NullColumn
(SequencescapeExcel::NullObjects)
NullColumnList
(SequencescapeExcel::NullObjects)
NullColumns
(SequencescapeExcel::NullObjects::NullConfiguration)
NullConfiguration
(SequencescapeExcel::NullObjects)
NullCustomMetadatumCollection
NullFieldInfo
(FieldInfo)
NullObjects
(SequencescapeExcel)
NullProcessor
(SequencescapeExcel::NullObjects)
NullRange
(SequencescapeExcel)
NullResponse
(Accession)
NullValidation
(SequencescapeExcel)
NullValidator
(RequestType::Validator)
O
ObjectSpaceProfile
OligoEnumerator
OneDTube
(SampleManifestExcel::Upload::Processor)
Options
(Informatics::Support)
Order
(Io)
Order
Order
(ModelExtensions)
OrderCompatibilityValidator
OrderIo
(Api)
OrderMade
(BroadcastEvent)
OrderMethods
(Submission::FlexibleRequestGraph)
OrderPresenter
(Submission)
OrderRequestTypes
(OrderCompatibilityValidator)
OrderResource
(Api::V2)
OrderRole
OrderTemplates
(Endpoints)
Orders
(Endpoints)
OrdersController
Output
(Core::Io::Base::JsonFormattingBehaviour)
Owned
(Asset::Ownership)
Ownership
(Asset)
P
PacBioLibraryTube
(Io)
PacBioLibraryTube
PacBioLibraryTubeIo
(Api)
PacBioRunIo
(Api::Messages)
PacBioRunWithTag2Io
(Api::Messages)
PacBioSamplePrepPipeline
PacBioSamplePrepRequest
PacBioSequencingPipeline
PacBioSequencingRequest
PageOfResults
(Core::Endpoint::BasicHandler::Paged::PagedTarget)
Paged
(Core::Endpoint::BasicHandler)
PagedTarget
(Core::Endpoint::BasicHandler::Paged)
ParentAssociation
(AssetCreation)
ParentPurposeRelationship
(Plate::Creator)
ParentsController
Parsers
Payload
(Accession::Submission)
PbmcCountParser
(Parsers)
PbmcPoolingCustomerRequest
PcrLibraryRequest
(IlluminaC::Requests)
Permission
PhiX
PhiXesController
Pick
(PickList)
PickByMicroLitre
(Cherrypick::Task)
PickByNanoGrams
(Cherrypick::Task)
PickByNanoGramsPerMicroLitre
(Cherrypick::Task)
PickData
(Robot)
PickHelpers
(Cherrypick::Task)
PickList
PickListJob
PickListResource
(Api::V2)
PickListsController
PickTarget
(CherrypickTask)
PicoAssayPlate
PicoDilutionPlate
Pipeline
(Io)
Pipeline
PipelineBehaviour
(Batch)
PipelineLoader
(RecordLoader)
PipelineRequestInformationType
PipelineRequestInformationTypeLoader
(RecordLoader)
Pipelines
(Endpoints)
PipelinesController
PipelinesHelper
PipelinesRequestType
Plate
(Io)
Plate
Plate
(CommentsProxy)
Plate
(Heron::Factories)
Plate
(SampleManifestExcel::Upload::Processor)
Plate
(SubmissionPool::Association)
Plate
(ModelExtensions)
PlateBarcode
PlateBarcode
(Dev)
PlateBehaviour
(SampleManifest)
PlateCherrypicked
(BroadcastEvent)
PlateCompletion
(WorkCompletion)
PlateConversion
(Io)
PlateConversion
PlateConversionResource
(Api::V2)
PlateConversions
(Endpoints)
PlateCreation
(Io)
PlateCreation
PlateCreationEvent
(Event)
PlateCreationResource
(Api::V2)
PlateCreations
(Endpoints)
PlateCreator
(LabelPrinter::Label)
PlateEvents
(Event)
PlateFromRack
(Heron::Factories)
PlateInformation
(UatActions)
PlateIo
(Api)
PlateLibraryComplete
(BroadcastEvent)
PlateMapGeneration
PlateOwner
PlatePicks
PlatePicksController
PlatePurpose
(Io)
PlatePurpose
PlatePurposeIo
(Api)
PlatePurposeLoader
(RecordLoader)
PlatePurposeResource
(Api::V2)
PlatePurposes
(Endpoints)
PlatePurposes
(Pulldown)
PlatePurposesController
(Admin)
PlateReaderParser
(Parsers)
PlateResource
(Api::V2)
PlateRow
(RequestType::PoolingMethod)
PlateState
(Transfer::State)
PlateSummariesController
PlateTemplate
(Io)
PlateTemplate
PlateTemplateHandler
(Tasks)
PlateTemplateResource
(Api::V2)
PlateTemplateTask
PlateTemplates
(Endpoints)
PlateTemplatesController
PlateToTubes
(LabelPrinter::Label)
PlateTransferHandler
(Tasks)
PlateTransferTask
PlateType
PlateTypeLoader
(RecordLoader)
PlateVolume
Plates
(Endpoints)
PlatesController
PlatesController
(Api::V2::Heron)
PlatesHelper
PlymouthV1
(Barcode::FormatHandlers)
PlymouthV2
(Barcode::FormatHandlers)
PmbClient
(LabelPrinter)
Policy
(Accessionable)
PolyMetadataHandler
(Study)
PolyMetadatum
PolyMetadatumResource
(Api::V2)
PolymorphicUploader
PoolReleased
(BroadcastEvent)
Poolable
(PreCapturePool)
PooledCherrypickRequest
PooledPlateCreation
(Io)
PooledPlateCreation
PooledPlateCreationResource
(Api::V2)
PooledPlateCreations
(Endpoints)
PooledRequest
(PreCapturePool)
Pooling
PoolingMetadata
(Plate)
PoolingMethod
(RequestType)
PoolingsController
PowerUser
(Ability::Shared)
PreCapturePool
PreCapturePoolResource
(Api::V2)
PrepKitBarcodeTask
PresenterSkeleton
(Submission)
Presenters
PrimerPanel
PrimerPanel
(SequencescapeExcel::SpecialisedField)
PrimerPanelLoader
(RecordLoader)
PrimerPanelResource
(Api::V2)
PrimerPanelsController
(Admin)
PrintJob
(LabelPrinter)
Priorities
(Submission)
Priority
(SequencescapeExcel::SpecialisedField)
PrivateMethods
(Receptacle::DownstreamAliquotsRemoval)
ProcessingError
(StudyReport)
Processor
(SampleManifestExcel::Upload)
Product
ProductCatalogue
ProductCatalogueLoader
(RecordLoader)
ProductCriteria
ProductHelpers
ProductLine
ProductProductCatalogue
Program
ProgramsController
(Admin)
ProgramsValidator
Project
(Io)
Project
Project
(ModelExtensions)
ProjectExtensions
(Api::Messages::FlowcellIo)
ProjectIo
(Api)
ProjectManager
ProjectResource
(Api::V2)
ProjectValidation
(Submission)
Projects
(Endpoints)
ProjectsController
ProjectsController
(Admin)
PrototypeReplacementHelper
PsdFormatter
PulldownMultiplexedLibraryCreationRequest
PulldownMultiplexedLibraryTube
PulldownMultiplexedLibraryTubeIo
(Api)
Purpose
(Io)
Purpose
Purpose
(Io::Tube)
Purpose
(Tube)
Purpose
(TubeRack)
PurposeRelationship
(Plate::Creator)
PurposeResource
(Api::V2)
Purposes
(Endpoints::Tube)
Q
QaManager
(Ability)
Qc
(Receptacle)
QcAssay
QcAssay
(BroadcastEvent)
QcAssayResource
(Api::V2)
QcDecision
(Io)
QcDecision
QcDecisionQcable
(QcDecision)
QcDecisions
(Endpoints)
QcFile
(Io)
QcFile
QcFileResource
(Api::V2)
QcFiles
(Endpoints)
QcFilesController
QcMetric
QcMetricRequest
QcReport
QcReportJob
QcReportPresenter
(Presenters)
QcReportsController
QcRequest
QcResult
QcResultFactory
QcResultIo
(Api::Messages)
QcResultResource
(Api::V2)
QcState
(QcMetric)
QcTube
Qcable
(Io)
Qcable
QcableAsset
(SharedBehaviour)
QcableCreator
(Io)
QcableCreator
QcableCreators
(Endpoints)
QcableLabware
(StateChanger)
QcableLibraryPlate
(StateChanger)
QcableLibraryPlatePurpose
QcablePlatePurpose
QcableResource
(Api::V2)
QcableTubePurpose
Qcables
(Endpoints)
QuadCreator
(Plate)
QuadStampController
Quadrants
(TagLayout)
QuantParser
(Parsers)
QueueBroadcastConsumer
(Warren::Subscriber)
R
RackedTube
RackedTubeResource
(Api::V2)
Randox
(Barcode::FormatHandlers)
RandoxEagle
(Barcode::FormatHandlers)
RandoxV2
(Barcode::FormatHandlers)
Range
(SequencescapeExcel)
RangeList
(SequencescapeExcel)
RangesWorksheet
(SequencescapeExcel::Worksheet)
ReIscLibraryRequest
(Pulldown::Requests)
ReRequestSubmission
ReadOnlyAttribute
(Core::Io::Base::JsonFormattingBehaviour::Input)
Receptacle
(Io)
Receptacle
Receptacle
(Api::V2::SharedBehaviour)
ReceptacleResource
(Api::V2)
ReceptaclesController
Recipients
(Heron::Factories::Concerns)
RecipientsCoordinates
(Heron::Factories::Concerns)
RecordCache
(PickList)
RecordInvalid
(ActiveRecord)
RecordLoader
RecordNotFound
(ActiveRecord)
RecordNotSaved
(ActiveRecord)
Recorder
(Core::Abilities::Base)
ReferenceGenome
(Io)
ReferenceGenome
ReferenceGenome
(SequencescapeExcel::SpecialisedField)
ReferenceGenomeIo
(Api)
ReferenceGenomes
(Endpoints)
ReferenceGenomesController
References
(Core)
Registry
(Core)
Registry
(Core::Io)
Relation
(Io::ActiveRecord)
Relationship
(Purpose)
Remover
(Aliquot)
Render
(BroadcastEvent::RenderHelpers)
RenderHelpers
(BroadcastEvent)
RenderableClassMethods
(BroadcastEvent::RenderHelpers)
RepoData
(Deployed)
ReportBehaviour
(QcReport)
ReportFail
ReportFailsController
ReportFailsHelper
Request
(Io)
Request
Request
(Core::Service)
Request
(RequestClassDeprecator)
Request
(Accession)
Request
(ModelExtensions)
Request
(Aliquot::DeprecatedBehaviours)
RequestBehaviour
(Batch)
RequestChain
(Submission::FlexibleRequestGraph)
RequestChainError
(Submission::FlexibleRequestGraph)
RequestClassDeprecator
RequestDescriptorUpdateEvent
(Event)
RequestEvent
RequestFactory
RequestFailAndRemover
(Batch)
RequestInformation
RequestInformationType
RequestInformationTypeLoader
(RecordLoader)
RequestIo
(Api)
RequestMetadataResource
(Api::V2)
RequestOptionForValidation
(ModelExtensions::Order)
RequestOptionsBehaviour
(Submission)
RequestOptionsValidator
(SequencingRequest)
RequestOptionsValidator
(PacBioSequencingRequest)
RequestOptionsValidator
(PacBioSamplePrepRequest)
RequestResource
(Api::V2)
RequestType
(Io)
RequestType
RequestTypeExtendedValidator
(ExtendedValidator)
RequestTypeLoader
(RecordLoader)
RequestTypePlatePurpose
(RequestType)
RequestTypePurposeCreation
RequestTypeResource
(Api::V2)
RequestTypeValidator
(RequestType::Validation)
RequestTypeValidatorsLoader
(RecordLoader)
RequestTypes
(Endpoints)
RequestTypesHelper
Requests
(Endpoints)
Requests
(Pulldown)
Requests
(IlluminaB)
Requests
(IlluminaC)
Requests
(IlluminaHtp)
RequestsController
RequestsController
(Batches)
RequestsHelper
RequestsInStorage
(Pipeline)
Resource
(QcResultFactory)
Resource
(Core::Io::Json::Grammar)
Response
(Core::Service)
Response
(Accession)
Response
(Endpoints::Uuids)
RetentionInstruction
(SequencescapeExcel::SpecialisedField)
RetentionInstructionHelper
Rin
(Well::AttributeUpdater)
Robot
(Io)
Robot
Robot
(ModelExtensions)
RobotBeds
(LabelPrinter::Label)
RobotLoader
(RecordLoader)
RobotPropertiesController
(Admin)
RobotProperty
RobotPropertyLoader
(RecordLoader)
RobotVerificationsController
Robots
(Endpoints)
RobotsController
(Admin)
Role
RolesController
(Admin)
Root
(Core::Io::Json::Grammar)
RootResponse
(Api::RootService)
RootService
(Api)
Row
(SampleManifestExcel::Upload)
Rows
(SampleManifestExcel::Upload)
Rvi
(Barcode::FormatHandlers)
S
Sample
(Io)
Sample
Sample
(Accession)
Sample
(Accessionable)
Sample
(Heron::Factories)
Sample
(ModelExtensions)
SampleAccessioningJob
SampleCompoundAliquotTransfer
(Request)
SampleCompoundComponent
SampleEbiAccessionNumber
(SequencescapeExcel::SpecialisedField)
SampleIo
(Api)
SampleLogisticsController
SampleLogisticsQcEvent
(Event)
SampleManagementGel
(Ability)
SampleManagementManager
(Ability)
SampleManagementUser
(Ability::Shared)
SampleManifest
(Io)
SampleManifest
SampleManifest
(ModelExtensions)
SampleManifestAsset
SampleManifestCreated
(BroadcastEvent)
SampleManifestEvent
(Event)
SampleManifestExcel
SampleManifestMultiplex
(LabelPrinter::Label)
SampleManifestPlate
(LabelPrinter::Label)
SampleManifestPlateDouble
(LabelPrinter::Label)
SampleManifestRedirect
(LabelPrinter::Label)
SampleManifestResource
(Api::V2)
SampleManifestTube
(LabelPrinter::Label)
SampleManifestUpdated
(BroadcastEvent)
SampleManifestUploadWithTagSequencesController
SampleManifests
(Endpoints)
SampleManifestsController
(Sdb)
SampleManifestsHelper
(Sdb)
SampleMetadataResource
(Api::V2)
SamplePrepQcTask
SampleResource
(Api::V2)
SampleTube
(Io)
SampleTube
SampleTube
(ModelExtensions)
SampleTubeBehaviour
(SampleManifest)
SampleTubeFactory
(Plate)
SampleTubeIo
(Api)
SampleTubeNotExists
(ExtractionAttribute)
SampleTubes
(Endpoints)
Samples
(Endpoints)
SamplesController
SamplesController
(Studies)
SamplesHelper
SangerBase
(Barcode::FormatHandlers)
SangerCode39
(Barcode::FormatHandlers)
SangerEan13
(Barcode::FormatHandlers)
SangerPlateId
(SequencescapeExcel::SpecialisedField)
SangerSampleId
SangerSampleId
(SequencescapeExcel::SpecialisedField)
SangerSampleIdValue
(SequencescapeExcel::SpecialisedField)
SangerTubeId
(SequencescapeExcel::SpecialisedField)
ScLibraryRequest
(Pulldown::Requests)
Scan
(LabWhereClient)
ScannedIntoLabEvent
(Event)
Search
(Io)
Search
Search
(Io::Endpoints::Uuids)
Search
(Endpoints::Uuids)
SearchActions
(Endpoints::Searches)
SearchBehaviour
Searches
(Endpoints)
SearchesController
Section
(Metadata)
SeedSubjectAssociation
(BroadcastEvent::SubjectHelpers)
SelfFinder
(MessengerCreator)
Sequencescape22
(Barcode::FormatHandlers)
SequencescapeExcel
SequencingComplete
(BroadcastEvent)
SequencingPipeline
SequencingQcBatch
SequencingRequest
(Io)
SequencingRequest
SequencingRequests
(Endpoints)
SequencingStart
(BroadcastEvent)
SequenomLoading
(Event)
SequenomQcPlate
SequenomQcPlatesController
Sequential
(Map)
Service
(Core)
Service
(Accession)
SessionsController
SetDescriptorsHandler
(Tasks)
SetDescriptorsTask
Shared
(SampleManifest::CoreBehaviour)
SharedBehaviour
SharedBehaviour
(Api::V2)
SharedLibraryPrep
(IlluminaHtp::Requests)
SharedLibraryTubeBehaviour
(Asset)
SharedTubeBehaviour
(SampleManifest)
SimpleManySubjectAssociation
(BroadcastEvent::SubjectHelpers)
SimpleMetadataFinder
(BroadcastEvent::MetadataHelpers)
SimpleSingleSubjectAssociation
(BroadcastEvent::SubjectHelpers)
SimpleTargetLookup
(BroadcastEvent::SubjectHelpers)
SingleProduct
(ProductCatalogue)
SingleReceptacleLabware
SingleRequestSubmission
SingleTarget
(BroadcastEvent::SubjectHelpers)
SnpCount
(Well::AttributeUpdater)
SourceData
(Submission::LinearRequestGraph)
SourceDestBeds
(Robot::Verification)
SourceDestControlBeds
(Robot::Verification)
SpecGenerator
(AbilityAnalysis)
SpecialisedField
(SequencescapeExcel)
SpeciesValidator
(ExtendedValidator)
SpecificTubeCreation
(Io)
SpecificTubeCreation
SpecificTubeCreationResource
(Api::V2)
SpecificTubeCreations
(Endpoints)
SpikedBuffer
SpikedBuffer
(PhiX)
SpikedBufferRecord
(AddSpikedInControlTask)
SpikedBuffersController
(PhiX)
SpreadsheetReader
(PlateTemplateTask)
Squishify
Stamp
(Io)
Stamp
Stamp
(ModelExtensions)
StampQcable
(Stamp)
Stamps
(Endpoints)
Standard
(Core::Endpoint::BasicHandler::Actions)
StandardMx
(Tube)
StandardNamedScopes
StandardPlate
(StateChanger)
StandardSeeder
(WorkingSetup)
State
(QcMetric::QcState)
State
(Transfer)
StateChange
(Io)
StateChange
StateChangeResource
(Api::V2)
StateChanger
StateChanges
(Endpoints)
StateMachine
(QcReport)
StateMachine
(Submission)
StateMachine
(SampleManifest)
StateMachineBehaviour
(Batch)
Statemachine
(Qcable)
Statemachine
(Request)
StaticMethods
(MbraveTagsCreator)
StaticRecords
(UatActions)
Statistics
(Request)
StdLibraryRequest
(IlluminaHtp::Requests)
StdLibraryRequest
(IlluminaB::Requests)
Stock
(PhiX)
Stock
(Asset)
StockAssets
(SampleManifest::CoreBehaviour)
StockLibraryTube
StockMultiplexedLibraryTube
(Io)
StockMultiplexedLibraryTube
StockMx
(Tube)
StockStamper
StockStampersController
StockTube
(StateChanger)
StockTubePurpose
(IlluminaHtp)
StocksController
(PhiX)
Storage
(CarrierWave)
Stream
(Core::Io::Json)
String
(Accession::CoreExtensions)
StripCreationRequest
StripTube
Studies
(Endpoints)
StudiesController
StudiesController
(Admin)
StudiesController
(Samples)
StudiesHelper
Study
(Io)
Study
Study
(Accessionable)
Study
(ModelExtensions)
StudyDetails
(StudyReport)
StudyIo
(Api)
StudyReport
StudyReportJob
StudyReportsController
StudyResource
(Api::V2)
StudySample
StudySampleIo
(Api)
StudyType
Style
(SequencescapeExcel::Helpers::Worksheet)
SubclassChecker
(SequencescapeExcel)
Subject
(BroadcastEvent::SubjectHelpers)
SubjectHelpers
(BroadcastEvent)
Subjectable
(BroadcastEvent::SubjectHelpers)
SubjectableClassMethods
(BroadcastEvent::SubjectHelpers)
Submission
(Io)
Submission
Submission
(Accession)
Submission
(Accessionable)
Submission
(ModelExtensions)
Submission
(RequestType::PoolingMethod)
SubmissionBuilderJob
SubmissionCreator
(Submission)
SubmissionIo
(Api)
SubmissionPool
(Io)
SubmissionPool
SubmissionPoolResource
(Api::V2)
SubmissionPools
(Endpoints)
SubmissionPresenter
(Submission)
SubmissionResource
(Api::V2)
SubmissionSerializer
SubmissionTemplate
(Io)
SubmissionTemplate
SubmissionTemplateLoader
(RecordLoader)
SubmissionTemplateRequestType
SubmissionTemplateResource
(Api::V2)
Submissions
(Endpoints)
SubmissionsController
SubmissionsHelper
SubmittedAsset
Substitution
(TagSubstitution)
Summary
(UiHelper)
Summary
(Request::Statistics)
SummaryItem
(UiHelper)
SuperUser
(Ability::Shared)
Supplier
(Io)
Supplier
Supplier
(BaitLibrary)
Suppliers
(Endpoints)
SuppliersController
(Sdb)
Support
(Informatics)
Swipecard
(LabelPrinter::Label)
Swipecardable
SystemRequest
T
Tabs
(Informatics::View)
Tag
Tag
(Accession)
Tag
(Accessionable::Base)
Tag2Group
(SequencescapeExcel::SpecialisedField)
Tag2Index
(SequencescapeExcel::SpecialisedField)
Tag2Layout
(Io)
Tag2Layout
Tag2LayoutTemplate
(Io)
Tag2LayoutTemplate
Tag2LayoutTemplates
(Endpoints)
Tag2Layouts
(Endpoints)
TagClash
(Aliquot)
TagClashReport
(Pooling)
TagCollectionDate
(Accession)
TagCountryOfOrigin
(Accession)
TagCreationUser
(Ability::Shared)
TagGroup
(Io)
TagGroup
TagGroup
(SequencescapeExcel::SpecialisedField)
TagGroupAdapterTypeLoader
(RecordLoader)
TagGroupAdapterTypeResource
(Api::V2)
TagGroupLoader
(RecordLoader)
TagGroupResource
(Api::V2)
TagGroups
(Endpoints)
TagGroupsController
TagGroupsTask
TagIndex
(SequencescapeExcel::SpecialisedField)
TagIo
(Api)
TagLayout
(Io)
TagLayout
TagLayout
(ModelExtensions)
TagLayoutResource
(Api::V2)
TagLayoutTemplate
(Io)
TagLayoutTemplate
TagLayoutTemplateResource
(Api::V2)
TagLayoutTemplates
(Endpoints)
TagLayoutTemplatesController
TagLayoutTemplatesLoader
(RecordLoader)
TagLayouts
(Endpoints)
TagList
(Accession)
TagResource
(Api::V2)
TagSet
TagSetLoader
(RecordLoader)
TagSetsController
TagSubstitution
TagSubstitutionHelper
TagSubstitutionsController
Tags
(SampleManifestExcel)
Target
(Attributable::Association)
Task
Tasks
Tecan
(Robot::Generator)
TecanDefault
(Robot::Generator::Behaviours)
TecanV2
(Robot::Generator)
Template
(Lot)
TemplateConstructor
(Limber::Helper)
TemplateResource
(Api::V2)
TemplateSubmission
(Tag2Layout)
TemplateSubmission
(TagLayout)
TestDownload
(SampleManifestExcel)
TestInformatics
TestSubmission
(UatActions)
TestWorksheet
(SampleManifestExcel::Worksheet)
Traction
(Request)
Transfer
(Io)
Transfer
TransferRequest
(Io)
TransferRequest
TransferRequestCollection
(Io)
TransferRequestCollection
TransferRequestCollectionResource
(Api::V2)
TransferRequestCollectionTransferRequest
TransferRequestCollections
(Endpoints)
TransferRequestResource
(Api::V2)
TransferRequests
(Endpoints)
TransferResource
(Api::V2)
TransferTemplate
(Io)
TransferTemplate
TransferTemplateLoader
(RecordLoader)
TransferTemplateResource
(Api::V2)
TransferTemplates
(Endpoints)
Transfers
(Endpoints)
TransfersBySchema
(Transfer)
TransfersToKnownDestination
(Transfer)
Tube
(Io)
Tube
Tube
(CommentsProxy)
Tube
(Heron::Factories)
Tube
(ModelExtensions)
TubeBase
(StateChanger)
TubeCompletion
(WorkCompletion)
TubeCreation
(Io)
TubeCreation
TubeCreations
(Endpoints)
TubeExtensions
(Api::Messages::QcResultIo)
TubeFromTubeCreation
(Io)
TubeFromTubeCreation
TubeFromTubeCreationResource
(Api::V2)
TubeFromTubeCreations
(Endpoints)
TubePurposeLoader
(RecordLoader)
TubePurposeResource
(Api::V2)
TubeRack
TubeRack
(CommentsProxy)
TubeRack
(Heron::Factories)
TubeRack
(SampleManifestExcel::Upload::Processor)
TubeRackBehaviour
(SampleManifest)
TubeRackPurposeLoader
(RecordLoader)
TubeRackResource
(Api::V2)
TubeRackStatus
TubeRackStatus
(Heron::Factories)
TubeRackStatusResource
(Api::V2)
TubeRackStatusesController
TubeRackStatusesController
(Api::V2::Heron)
TubeRackSummariesController
TubeRacksController
(Api::V2::Heron)
TubeResource
(Api::V2)
TubeState
(Transfer::State)
TubeStockResourceIo
(Api::Messages)
TubeSubmission
(UatActions)
Tubes
(Endpoints)
U
UatActionGenerator
UatActions
UatActionsController
UiHelper
UkBiocentreEagle
(Barcode::FormatHandlers)
UkBiocentreUnid
(Barcode::FormatHandlers)
UkBiocentreV1
(Barcode::FormatHandlers)
UkBiocentreV2
(Barcode::FormatHandlers)
UkBiocentreV3
(Barcode::FormatHandlers)
UkBiocentreV4
(Barcode::FormatHandlers)
UkBiocentreV5
(Barcode::FormatHandlers)
UkBiocentreV6
(Barcode::FormatHandlers)
UkBiocentreV7
(Barcode::FormatHandlers)
UnauthenticatedError
(Core::Service::Authentication)
Uniqueness
(SampleManifestExcel::Tags::Validator)
Unowned
(Asset::Ownership)
UnplexedLink
(Submission::FlexibleRequestGraph)
UnspecifiedBehaviour
(SampleManifest)
UnsuitableAccessionService
UnsupportedAction
(Core::Service)
UnsupportedAction
(Core::Endpoint::BasicHandler::Actions)
Upload
(SequencescapeExcel)
Upload
(SampleManifestExcel)
Uploader
(SampleManifest)
Uploader
(DbFile)
User
(Io)
User
User
(Core::Abilities)
UserResource
(Api::V2)
UserRole
(Role)
UserRoleHelper
(Role)
UserStub
(AbilityAnalysis)
Users
(Endpoints)
UsersController
UsersController
(Admin)
UsersController
(Admin::Roles)
UsersHelper
Utf8mb3Validator
Uuid
UuidCache
(TransferRequestCollection)
Uuidable
(Uuid)
Uuids
(Endpoints)
UuidsController
V
V2
(Api)
ValidateSampleSheetTask
Validateable
Validation
(SequencescapeExcel)
Validation
(RequestType)
ValidationError
(ActiveModel)
ValidationStateGuard
Validations
(ModelExtensions::Order)
ValidationsByTemplateName
(Submission)
Validator
(DelegateValidation)
Validator
(RequestType)
Validator
(SampleManifestExcel::Tags)
ValueRequired
(SequencescapeExcel::SpecialisedField)
ValueToInteger
(SequencescapeExcel::SpecialisedField)
ValueToUpcase
(SequencescapeExcel::SpecialisedField)
Verification
(Robot)
View
(Informatics)
ViewBuilder
(Metadata)
ViewsSchema
Volume
(Tube::AttributeUpdater)
Volume
(Well::AttributeUpdater)
Volume
(SequencescapeExcel::SpecialisedField)
VolumeByMicroLitre
(Cherrypick)
VolumeByNanoGrams
(Cherrypick)
VolumeByNanoGramsPerMicroLitre
(Cherrypick)
VolumeCheck
VolumeUpdate
(Io)
VolumeUpdate
VolumeUpdateResource
(Api::V2)
VolumeUpdates
(Endpoints)
W
WalkManualWellsByPools
(TagLayout)
WalkManualWellsOfPlate
(TagLayout)
WalkWellsByPools
(TagLayout)
WalkWellsOfPlate
(TagLayout)
Walker
(TagLayout)
WarehouseAsset
(Api::RequestIo)
Well
(Io)
Well
Well
(SequencescapeExcel::SpecialisedField)
Well
(ModelExtensions)
WellAlreadyHasSample
(ExtractionAttribute)
WellAttribute
WellDetails
(StudyReport)
WellExtensions
(Api::Messages::FluidigmPlateIo)
WellExtensions
(Api::Messages::QcResultIo)
WellFinder
(MessengerCreator)
WellIo
(Api)
WellNotExists
(ExtractionAttribute)
WellResource
(Api::V2)
WellStockResourceIo
(Api::Messages)
WellToTube
(Transfer::BetweenPlateAndTubes)
Wells
(Endpoints)
WgsLibraryRequest
(Pulldown::Requests)
WorkCompletion
(Io)
WorkCompletion
WorkCompletions
(Endpoints)
WorkCompletionsSubmission
WorkOrder
WorkOrderResource
(Api::V2)
WorkOrderType
Workflow
WorkflowLoader
(RecordLoader)
WorkflowsController
WorkflowsHelper
WorkingDilutionPlate
WorkingSetup
Worksheet
(PacBio)
Worksheet
(SequencescapeExcel)
Worksheet
(SequencescapeExcel::Helpers)
Worksheet
(BulkSubmissionExcel)
Worksheet
(SampleManifestExcel)
X
XmlLoginProxy