Class: FluidigmFile::Assay

Inherits:
Object
  • Object
show all
Defined in:
app/models/fluidigm_file.rb

Constant Summary collapse

@@valid_markers = 
%w[XX XY YY]
@@gender_map = 
{ 'XX' => 'F', 'YY' => 'F', 'XY' => 'M' }

Instance Attribute Summary collapse

Instance Method Summary collapse

Constructor Details

#initialize(name, result) ⇒ Assay

Returns a new instance of Assay.



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# File 'app/models/fluidigm_file.rb', line 40

def initialize(name, result)
  @name = name
  @result = result
end

Instance Attribute Details

#name ⇒ Object (readonly)

Returns the value of attribute name.



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# File 'app/models/fluidigm_file.rb', line 35

def name
  @name
end

#result ⇒ Object (readonly)

Returns the value of attribute result.



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# File 'app/models/fluidigm_file.rb', line 35

def result
  @result
end

Instance Method Details

#gender ⇒ Object 



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# File 'app/models/fluidigm_file.rb', line 49

def gender
  @@gender_map[result] || 'U'
end

#gender_marker? ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'app/models/fluidigm_file.rb', line 45

def gender_marker?
  /^GS/.match?(name)
end

#pass? ⇒ Boolean

Returns:

  • (Boolean) 


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# File 'app/models/fluidigm_file.rb', line 53

def pass?
  @@valid_markers.include?(result)
end