Class: Robot::Generator::TecanV2

Inherits:
Base
  • Object
show all
Includes:
Behaviours::TecanDefault
Defined in:
app/models/robot/generator/tecan_v2.rb

Overview

Handles picking file generation for Tecan robots

Direct Known Subclasses

TecanV3

Constant Summary collapse

NUM_BUFFER_CHANNELS = 
8

Instance Attribute Summary

Attributes inherited from Base

#batch, #ctrl_barcode_index, #dest_barcode_index, #picking_data, #plate_barcode, #source_barcode_index

Instance Method Summary collapse

Methods inherited from Base

#initialize, #total_volume, #type

Constructor Details

This class inherits a constructor from Robot::Generator::Base

Instance Method Details

#as_text ⇒ Object 



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# File 'app/models/robot/generator/tecan_v2.rb', line 11

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end

#filename(base) ⇒ Object 



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# File 'app/models/robot/generator/tecan_v2.rb', line 7

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end