Module: UltimaSampleSheet::UG200SampleSheetGenerator

Defined in:
app/controllers/ultima_sample_sheet/ug200_sample_sheet_generator.rb

Defined Under Namespace

Classes: Generator

Class Method Summary collapse

Class Method Details

.generate(batch) ⇒ String

Initiates the sample sheet generation for the given batch.

Parameters:

  • batch (Batch) —

    the Ultima UG200 sequencing batch to generate sample sheets for

Returns:

  • (String) —

    the ZIP archive as a binary string



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# File 'app/controllers/ultima_sample_sheet/ug200_sample_sheet_generator.rb', line 7

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end