Class: SequencescapeExcel::SpecialisedField::SampleEBIAccessionNumber

Inherits:
Object
  • Object
show all
Includes:
Base
Defined in:
app/sequencescape_excel/sequencescape_excel/specialised_field/sample_ebi_accession_number.rb

Overview

The accession number should only be updated if it is currently null or it is the same If the accession number differs from the current one the world will come crashing down.

Instance Attribute Summary

Attributes included from Base

#sample_manifest_asset, #value

Instance Method Summary collapse

Methods included from Base

#link

Instance Method Details

#update(_attributes = {}) ⇒ Object 



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# File 'app/sequencescape_excel/sequencescape_excel/specialised_field/sample_ebi_accession_number.rb', line 13

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end