Class: Api::V2::SubmissionTemplateResource

Inherits:
BaseResource
  • Object
show all
Defined in:
app/resources/api/v2/submission_template_resource.rb

Overview

Note:

This resource is immutable: its endpoint will not accept POST, PATCH, or DELETE requests.

Note:

Access this resource via the /api/v2/submission_templates/ endpoint.

Provides a JSON:API representation of SubmissionTemplate.

A SubmissionTemplate associates a name to a pre-filled submission (subclass) and a serialized set of attributes A SubmissionTemplate is typically used to standardize submission parameters, making it easier to create new submissions with predefined settings. Users can retrieve submission templates to understand their configurations.

For more information about JSON:API, see the JSON:API Specifications or look at the JSONAPI::Resources package for Sequencescape's implementation of the JSON:API standard.

Examples:

GET request for all SubmissionTemplate resources

GET /api/v2/submission_templates/

GET request for a SubmissionTemplate with a specific ID

GET /api/v2/submission_templates/{id}

Instance Attribute Summary collapse

Instance Method Summary collapse

Methods inherited from BaseResource

apply_includes, creatable_fields, default_includes, #fetchable_fields, inclusions, resolve_relationship_names_to_relations, updatable_fields

Instance Attribute Details

#name ⇒ String (readonly)

Returns The name of the submission template.

Returns:

  • (String) —

    The name of the submission template.



40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
 
# File 'app/resources/api/v2/submission_template_resource.rb', line 40

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end

#request_type_keys ⇒ Array<String> (readonly)

Returns The request type keys associated with this submission template.

Returns:

  • (Array<String>) —

    The request type keys associated with this submission template.



44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
 
# File 'app/resources/api/v2/submission_template_resource.rb', line 44

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end

#uuid ⇒ String (readonly)

Note:

This identifier is automatically assigned and cannot be modified.

Returns The UUID of the submission template.

Returns:

  • (String) —

    The UUID of the submission template.



36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
 
# File 'app/resources/api/v2/submission_template_resource.rb', line 36

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end

Instance Method Details

#filter_uuid ⇒ SubmissionTemplateResource

Filters

Filter SubmissionTemplate resource by template uuid.

Examples:

Filter submission templates by UUID

GET /api/v2/submission_templates?filter[uuid]=7a8029bc-1094-11f1-bb65-16cc5efe8600

Returns:



56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
 
# File 'app/resources/api/v2/submission_template_resource.rb', line 56

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end