Class: UatActions::GenerateSampleManifest

Inherits:
UatActions
  • Object
show all
Defined in:
app/uat_actions/uat_actions/generate_sample_manifest.rb

Overview

Will construct a sample manifest

Constant Summary

Constants inherited from UatActions

CATEGORY_LIST

Class Method Summary collapse

Instance Method Summary collapse

Methods inherited from UatActions

all, category, find, form_field, form_fields, #form_fields, grouped_and_sorted_uat_actions, id, inherited, permitted, #report, #save, to_partial_path, uat_actions

Class Method Details

.default ⇒ Object 



44
45
46
47
48
49
50
51
52
 
# File 'app/uat_actions/uat_actions/generate_sample_manifest.rb', line 44

def self.default
  new(
    study_name: UatActions::StaticRecords.study.name,
    supplier_name: UatActions::StaticRecords.supplier.name,
    asset_type: '1dtube',
    count: 2,
    tube_purpose_name: UatActions::StaticRecords.tube_purpose.name
  )
end

Instance Method Details

#create_sample_manifest ⇒ Object 



62
63
64
 
# File 'app/uat_actions/uat_actions/generate_sample_manifest.rb', line 62

def create_sample_manifest
  SampleManifest.create!(study:, supplier:, asset_type:, count:, purpose:)
end

#create_samples(sample_manifest) ⇒ Object 



71
72
73
74
75
76
77
78
79
80
 
# File 'app/uat_actions/uat_actions/generate_sample_manifest.rb', line 71

def create_samples(sample_manifest)
  sample_manifest.assets.each do |asset|
    raise 'Manifest for plates is not supported yet' unless asset_type == '1dtube'

    create_sample("Sample_#{asset.human_barcode}_1", sample_manifest).tap do |sample|
      asset.aliquots.create!(sample:, study:)
      study.samples << sample
    end
  end
end

#generate_manifest(sample_manifest) ⇒ Object 



66
67
68
69
 
# File 'app/uat_actions/uat_actions/generate_sample_manifest.rb', line 66

def generate_manifest(sample_manifest)
  sample_manifest.generate
  create_samples(sample_manifest) if with_samples == '1'
end

#perform ⇒ Object 



54
55
56
57
58
59
60
 
# File 'app/uat_actions/uat_actions/generate_sample_manifest.rb', line 54

def perform
  sample_manifest = create_sample_manifest
  generate_manifest(sample_manifest)
  print_report(sample_manifest)

  true
end