Module: Request::HasPrimerPanel

Extended by:
ActiveSupport::Concern
Included in:
IlluminaHtp::Requests::GbsRequest, IlluminaHtp::Requests::HeronRequest, IlluminaHtp::Requests::HeronTailedRequest
Defined in:
app/models/concerns/request/has_primer_panel.rb

Overview

Note:

The actual primer_panel association is set-up on Metadata::Metadata

Include in Request classes to add tracking of primer panels Sets up:

  • An Attributable::association for primer_panel (Used to help render forms for requests)
  • Sets primer_panel as required on create
  • Adds primer_panel and primer_panel_id methods to the request
  • Adds primer panel information to the pool_information

Instance Method Summary collapse

Instance Method Details

#update_pool_information(pool_information) ⇒ Object 



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# File 'app/models/concerns/request/has_primer_panel.rb', line 24

has_metadata do
  # NOTE: The following attribute is not required for Microarray Genotyping.
  # I think this might be broken and suggests that there should be separate classes for project: one for
  # next-gen sequencing that includes this attribute in it's metadata, and one for microarray genotyping
  # that doesn't.
  include ProjectManager::Associations
  include BudgetDivision::Associations

  custom_attribute(:project_cost_code, required: true)
  custom_attribute(:funding_comments)
  custom_attribute(:collaborators)
  custom_attribute(:external_funding_source)
  custom_attribute(:sequencing_budget_cost_centre)
  custom_attribute(:project_funding_model, in: PROJECT_FUNDING_MODELS)
  custom_attribute(:gt_committee_tracking_id)

  before_validation do |record|
    record.project_cost_code = nil if record.project_cost_code.blank?
    record.project_funding_model = nil if record.project_funding_model.blank?
  end
end