Module: MultiSourcedPool

Extended by:
ActiveSupport::Concern
Included in:
Pacbio::Pool
Defined in:
app/models/concerns/multi_sourced_pool.rb

Overview

Include in a pool record to provide a #source_identifier method based on source plates, source tubes and libraries

Instance Method Summary collapse

Instance Method Details

#source_identifier ⇒ String

Note:

Assumes 96 well plates. formatted_range can take a second argument

Identifies the plate and wells from which the pool was created Typically in the format: DN123:A1-D1. In the unlikely event we have multiple plates, will include them all of plate_size if this ever changes.

Returns:

  • (String) —

    Identifies source plate and wells. eg. ‘DN123:A1-D1



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# File 'app/models/concerns/multi_sourced_pool.rb', line 29

def source_identifier
  formatted_wells = wells_grouped_by_container.map do |plate, wells|
    well_range = plate.formatted_range(wells.pluck(:position))
    "#{plate.barcode}:#{well_range}"
  end.join(',')
  formatted_tubes = source_tubes.pluck(:barcode).join(',')
  formatted_libraries = libraries.collect(&:tube).pluck(:barcode).join(',')
  # Combines the two outputs checking neither are empty
  [formatted_wells, formatted_tubes, formatted_libraries].compact_blank.join(',')
end